PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0094s0038.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 243aa    MW: 26514.2 Da    PI: 8.4696
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0094s0038.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-19128178255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  Kalax.0094s0038.1.p 128 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAFQMRG 178
                          8********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.55E-30127186No hitNo description
Gene3DG3DSA:3.30.730.107.1E-32127186IPR001471AP2/ERF domain
PROSITE profilePS5103224.434128186IPR001471AP2/ERF domain
PfamPF008473.7E-14128178IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-23128188IPR016177DNA-binding domain
SMARTSM003801.7E-38128192IPR001471AP2/ERF domain
PRINTSPR003671.3E-10129140IPR001471AP2/ERF domain
PRINTSPR003671.3E-10152168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MCDQVCSEND LAFLESIRRH LLDDSEIPMM FPTPGSSAAA AAAPRYARTS SFSSLFTENW  60
GELPLKENDS EDMVLFGVLR DAASAGWIPC LTPNKQGMMG VKAEPVVENG REGGVVVMPV  120
VVPAKGKHYR GVRRRPWGKF AAEIRDPAKN GARVWLGTYE TAEDAALAYD RAAFQMRGSR  180
ALLNFPLRIN SGEPAPVRIT AKRNSPEPSS SSESMASPKR MRKEVKKEEV SIWTGGDQLL  240
VS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A1e-42124193170ATERF1
2gcc_A1e-42124193170ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008437026.18e-86PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotO803374e-75EF100_ARATH; Ethylene-responsive transcription factor 1A
TrEMBLA0A0F6RA572e-86A0A0F6RA57_9R
STRINGGLYMA11G03910.29e-85(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-62ethylene responsive element binding factor 1